Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | C1O30_RS04655 | Not Available | Positive | 1010867 - 1013020 | 79955.8 |
| l-asparagine permease | C1O30_RS04660 | Not Available | Negative | 1013095 - 1014552 | 52828.5 |
| membrane-bound lytic murein transglycosylase mltc | C1O30_RS04665 | Not Available | Negative | 1015004 - 1016086 | 40282.0 |
| oxidative damage protection protein | C1O30_RS04670 | Not Available | Negative | 1016141 - 1016413 | 10718.9 |
| a/g-specific adenine glycosylase | C1O30_RS04675 | Not Available | Negative | 1016416 - 1017501 | 41132.5 |
| trna (guanosine(46)-n7)-methyltransferase trmb | C1O30_RS04680 | Not Available | Positive | 1017660 - 1018379 | 27101.7 |
| yggl family protein | C1O30_RS04685 | Not Available | Positive | 1018379 - 1018723 | 13279.7 |
| duf2884 domain-containing protein | C1O30_RS04690 | Not Available | Positive | 1018847 - 1019563 | 26401.4 |
| autotransporter serine protease | C1O30_RS04695 | Not Available | Positive | 1020309 - 1023440 | 109587.0 |
| nadp(h)-dependent aldo-keto reductase | C1O30_RS04700 | Not Available | Negative | 1023545 - 1024585 | 38470.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
