Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | SDE_RS07490 | Not Available | Positive | 1849121 - 1849546 | 15381.4 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | SDE_RS07495 | Not Available | Positive | 1849583 - 1850779 | 43969.8 |
| type iv pilus biogenesis/stability protein pilw | SDE_RS07500 | Not Available | Positive | 1850822 - 1851601 | 29204.9 |
| rodz domain-containing protein | SDE_RS07505 | Not Available | Positive | 1851684 - 1852679 | 36306.4 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | SDE_RS07510 | Not Available | Positive | 1852727 - 1853839 | 40189.9 |
| histidine--trna ligase | SDE_RS07515 | Not Available | Positive | 1853884 - 1855155 | 47573.1 |
| yfgm family protein | SDE_RS07520 | Not Available | Positive | 1855165 - 1855881 | 25338.6 |
| outer membrane protein assembly factor bamb | SDE_RS07525 | Not Available | Positive | 1855881 - 1857035 | 41316.1 |
| ribosome biogenesis gtpase der | SDE_RS07530 | Not Available | Positive | 1857099 - 1858514 | 52082.5 |
| hypothetical protein | SDE_RS07535 | Not Available | Negative | 1858619 - 1859599 | 36862.4 |
Pathways
1253 pathways
Health Effects
No health effects information available for this bacterium.
