Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative urea abc transporter substrate-binding protein | SDE_RS05895 | Not Available | Positive | 1455580 - 1456632 | 37951.4 |
| abc transporter permease | SDE_RS05900 | Not Available | Positive | 1456796 - 1457611 | 30519.7 |
| abc transporter atp-binding protein | SDE_RS05905 | Not Available | Positive | 1457620 - 1458423 | 29548.7 |
| urea amidolyase associated protein uaap1 | SDE_RS05910 | Not Available | Positive | 1458451 - 1459188 | 27759.7 |
| urea amidolyase associated protein uaap2 | SDE_RS05915 | Not Available | Positive | 1459204 - 1459842 | 23312.4 |
| urea carboxylase | SDE_RS05920 | Not Available | Positive | 1459939 - 1463568 | 132441.0 |
| allophanate hydrolase | SDE_RS05925 | Not Available | Positive | 1463570 - 1465366 | 63544.7 |
| pep-cterm domain protein | SDE_RS05930 | Not Available | Negative | 1465476 - 1466081 | 21367.8 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | SDE_RS05935 | Not Available | Negative | 1466591 - 1467055 | 17495.1 |
| type iv pilus biogenesis protein pilm | SDE_RS05940 | Not Available | Positive | 1467289 - 1468230 | 33833.8 |
Pathways
1253 pathways
Health Effects
No health effects information available for this bacterium.
