Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Peptidase m23 | AYO71_RS08395 | Not Available | Positive | 1935978 - 1936847 | 30598.4 |
| Rna polymerase sigma factor | AYO71_RS08400 | Not Available | Positive | 1936954 - 1937961 | 38246.6 |
| ferredoxin fdxa | AYO71_RS08405 | Not Available | Negative | 1938490 - 1938813 | 12149.3 |
| Putative mismatch repair protein | AYO71_RS08410 | Not Available | Negative | 1938977 - 1941559 | 95300.8 |
| Putative cro/ci transcriptional regulator | AYO71_RS08415 | Not Available | Positive | 1941762 - 1942505 | 27735.9 |
| tail fiber assembly protein | AYO71_RS08420 | Not Available | Positive | 1942964 - 1943476 | 19383.2 |
| phage holin family protein | AYO71_RS08425 | Not Available | Positive | 1943614 - 1943952 | 11896.8 |
| Putative phage-related protein | AYO71_RS08430 | Not Available | Positive | 1944024 - 1944545 | 18772.2 |
| Putative baseplate assembly protein v | AYO71_RS08435 | Not Available | Positive | 1944549 - 1945157 | 21607.6 |
| Putative baseplate assembly protein | AYO71_RS08440 | Not Available | Positive | 1945172 - 1945504 | 12231.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
