Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 family protein | AYO71_RS03360 | Not Available | Negative | 736372 - 737115 | 26773.7 |
| tyrosine-protein phosphatase | AYO71_RS03365 | Not Available | Positive | 737396 - 738043 | 23846.5 |
| m3 family metallopeptidase | AYO71_RS03370 | Not Available | Negative | 738049 - 740076 | 75888.8 |
| yhev family putative zinc ribbon protein | AYO71_RS03375 | Not Available | Negative | 740190 - 740480 | 10516.7 |
| oligopeptidase a | AYO71_RS03380 | Not Available | Negative | 740477 - 742528 | 75611.0 |
| gamma carbonic anhydrase family protein | AYO71_RS03385 | Not Available | Positive | 742618 - 743163 | 19371.4 |
| had family hydrolase | AYO71_RS03390 | Not Available | Positive | 743192 - 743842 | 24646.2 |
| aminopeptidase | AYO71_RS03395 | Not Available | Negative | 743942 - 745018 | 41068.0 |
| hypothetical protein | AYO71_RS03400 | Not Available | Positive | 745077 - 745499 | 15568.5 |
| hypothetical protein | AYO71_RS03405 | Not Available | Positive | 745539 - 745958 | 15573.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
