Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 3 | AYO71_RS03310 | Not Available | Negative | 723994 - 724881 | 33328.1 |
| cytochrome c oxidase assembly protein | AYO71_RS03315 | Not Available | Negative | 724907 - 725458 | 20244.6 |
| cytochrome c oxidase subunit i | AYO71_RS03320 | Not Available | Negative | 725614 - 727200 | 58595.8 |
| cytochrome c oxidase subunit ii | AYO71_RS03325 | Not Available | Negative | 727283 - 728410 | 42061.1 |
| hypothetical protein | AYO71_RS03330 | Not Available | Positive | 728781 - 729431 | 24075.6 |
| sulp family inorganic anion transporter | AYO71_RS03335 | Not Available | Negative | 729555 - 731081 | 53502.2 |
| carbonic anhydrase | AYO71_RS03340 | Not Available | Negative | 731172 - 731900 | 26512.7 |
| pa0069 family radical sam protein | AYO71_RS03345 | Not Available | Negative | 732138 - 733196 | 39516.7 |
| cytochrome c | AYO71_RS03350 | Not Available | Negative | 733271 - 734572 | 46746.0 |
| gmc family oxidoreductase | AYO71_RS03355 | Not Available | Negative | 734585 - 736369 | 64835.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
