Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase hpii | AYO71_RS03260 | Not Available | Negative | 714625 - 716766 | 78325.7 |
| methionine abc transporter atp-binding protein | AYO71_RS03265 | Not Available | Positive | 717030 - 718037 | 36487.0 |
| methionine abc transporter permease | AYO71_RS03270 | Not Available | Positive | 718037 - 718711 | 24166.7 |
| metq/nlpa family abc transporter substrate-binding protein | AYO71_RS03275 | Not Available | Positive | 718776 - 719546 | 27690.5 |
| sco family protein | AYO71_RS03280 | Not Available | Negative | 719721 - 720356 | 22995.1 |
| heme o synthase | AYO71_RS03285 | Not Available | Negative | 720353 - 721252 | 32673.0 |
| heme a synthase | AYO71_RS03290 | Not Available | Negative | 721240 - 722319 | 38561.1 |
| hypothetical protein | AYO71_RS03295 | Not Available | Negative | 722330 - 722923 | 21775.5 |
| surf1 family protein | AYO71_RS03300 | Not Available | Negative | 722889 - 723629 | 27659.4 |
| twin transmembrane helix small protein | AYO71_RS03305 | Not Available | Positive | 723700 - 723903 | 7216.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
