Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c5 family protein | AYO71_RS03210 | Not Available | Negative | 704896 - 705201 | 10937.3 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | AYO71_RS03215 | Not Available | Positive | 705393 - 706037 | 23828.9 |
| dna polymerase i | AYO71_RS03220 | Not Available | Negative | 706439 - 709243 | 102146.0 |
| duf2782 domain-containing protein | AYO71_RS03225 | Not Available | Positive | 709318 - 709608 | 10647.8 |
| homoserine kinase | AYO71_RS03230 | Not Available | Positive | 709662 - 710615 | 35559.9 |
| zinc abc transporter substrate-binding protein | AYO71_RS03235 | Not Available | Negative | 710744 - 711664 | 33172.6 |
| fur family transcriptional regulator | AYO71_RS03240 | Not Available | Positive | 711731 - 712213 | 17390.0 |
| zinc abc transporter atp-binding protein znuc | AYO71_RS03245 | Not Available | Positive | 712213 - 712998 | 28109.2 |
| zinc abc transporter permease subunit znub | AYO71_RS03250 | Not Available | Positive | 712991 - 713779 | 27340.9 |
| pa5502 family lipoprotein | AYO71_RS03255 | Not Available | Positive | 713817 - 714530 | 25446.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
