Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1328 domain-containing protein | AYO71_RS28565 | Not Available | Negative | 693839 - 694003 | 5724.41 |
| hypothetical protein | AYO71_RS03165 | Not Available | Negative | 694078 - 694362 | 10706.9 |
| sigma-54-dependent response regulator transcription factor algb | AYO71_RS03170 | Not Available | Positive | 694791 - 696137 | 49504.2 |
| atp-binding protein | AYO71_RS03175 | Not Available | Positive | 696148 - 697938 | 65540.4 |
| eal domain-containing protein | AYO71_RS03180 | Not Available | Negative | 697935 - 699548 | 59964.8 |
| n-acetylmuramoyl-l-alanine amidase | AYO71_RS03185 | Not Available | Negative | 699624 - 700406 | 29007.4 |
| diguanylate cyclase | AYO71_RS03190 | Not Available | Negative | 700508 - 702523 | 74185.2 |
| endonuclease/exonuclease/phosphatase family protein | AYO71_RS03195 | Not Available | Negative | 702520 - 703398 | 32518.3 |
| thiol:disulfide interchange protein dsba/dsbl | AYO71_RS03200 | Not Available | Negative | 703413 - 704054 | 23130.9 |
| cytochrome c | AYO71_RS03205 | Not Available | Negative | 704254 - 704865 | 20951.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
