Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na/pi cotransporter family protein | AYO71_RS03115 | Not Available | Positive | 681726 - 683384 | 59959.6 |
| pitrilysin family protein | AYO71_RS03120 | Not Available | Positive | 683561 - 684955 | 51930.1 |
| duf5924 family protein | AYO71_RS03125 | Not Available | Positive | 685168 - 686196 | 38366.3 |
| abc transporter permease | AYO71_RS03130 | Not Available | Positive | 686251 - 687399 | 40381.9 |
| abc transporter atp-binding protein | AYO71_RS03135 | Not Available | Positive | 687396 - 688199 | 28623.7 |
| mlad family protein | AYO71_RS03140 | Not Available | Positive | 688201 - 689139 | 33319.9 |
| abc-type transport auxiliary lipoprotein family protein | AYO71_RS03145 | Not Available | Positive | 689136 - 689762 | 22307.7 |
| nucleoside recognition domain-containing protein | AYO71_RS03150 | Not Available | Negative | 689878 - 691107 | 43168.1 |
| glutamate/aspartate:proton symporter gltp | AYO71_RS03155 | Not Available | Negative | 691324 - 692655 | 47816.0 |
| inhibitor of vertebrate lysozyme family protein | AYO71_RS03160 | Not Available | Negative | 693372 - 693836 | 17252.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
