Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | AYO71_RS03065 | Not Available | Positive | 670512 - 671426 | 34494.4 |
| shikimate dehydrogenase | AYO71_RS03070 | Not Available | Positive | 671436 - 672257 | 29149.0 |
| sulp family inorganic anion transporter | AYO71_RS03075 | Not Available | Negative | 672335 - 673903 | 56217.0 |
| choline abc transporter substrate-binding protein | AYO71_RS03080 | Not Available | Negative | 674116 - 675036 | 33275.1 |
| choline-sulfatase | AYO71_RS03085 | Not Available | Negative | 675047 - 676567 | 57337.0 |
| choline sulfate utilization transcriptional regulator | AYO71_RS03090 | Not Available | Positive | 676682 - 677632 | 35347.7 |
| nad(p)-dependent oxidoreductase | AYO71_RS03095 | Not Available | Negative | 677656 - 678321 | 23541.2 |
| dopa 4,5-dioxygenase family protein | AYO71_RS03100 | Not Available | Positive | 678403 - 678729 | 12104.6 |
| citmhs family transporter | AYO71_RS03105 | Not Available | Positive | 679133 - 680440 | 46479.2 |
| terc family protein | AYO71_RS03110 | Not Available | Positive | 680526 - 681293 | 28246.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
