Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | AYO71_RS03015 | Not Available | Negative | 660602 - 660916 | 11467.8 |
| trk system potassium transporter trka | AYO71_RS03020 | Not Available | Negative | 661066 - 662442 | 50044.3 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | AYO71_RS03025 | Not Available | Negative | 662464 - 663774 | 47325.1 |
| methionyl-trna formyltransferase | AYO71_RS03030 | Not Available | Negative | 663771 - 664730 | 33840.0 |
| peptide deformylase | AYO71_RS03035 | Not Available | Negative | 664788 - 665294 | 19341.4 |
| lysm peptidoglycan-binding domain-containing protein | AYO71_RS03040 | Not Available | Positive | 665454 - 666479 | 37460.0 |
| dna-processing protein dpra | AYO71_RS03045 | Not Available | Positive | 666564 - 667661 | 38474.5 |
| l-threonylcarbamoyladenylate synthase | AYO71_RS03050 | Not Available | Positive | 667717 - 668274 | 20628.6 |
| hypothetical protein | AYO71_RS03055 | Not Available | Positive | 668332 - 669204 | 33456.6 |
| quinone oxidoreductase | AYO71_RS03060 | Not Available | Negative | 669384 - 670361 | 34314.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
