Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AYO71_RS02965 | Not Available | Negative | 649364 - 650761 | 51845.6 |
| hypothetical protein | AYO71_RS02970 | Not Available | Negative | 650843 - 651244 | 15126.7 |
| response regulator transcription factor | AYO71_RS02975 | Not Available | Negative | 651974 - 652693 | 27604.7 |
| hamp domain-containing sensor histidine kinase | AYO71_RS02980 | Not Available | Positive | 652858 - 654393 | 57591.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AYO71_RS02985 | Not Available | Negative | 654564 - 655343 | 28949.4 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | AYO71_RS02990 | Not Available | Negative | 655428 - 655967 | 19257.3 |
| glycine--trna ligase subunit beta | AYO71_RS02995 | Not Available | Negative | 655972 - 658026 | 74608.4 |
| glycine--trna ligase subunit alpha | AYO71_RS03000 | Not Available | Negative | 658023 - 658976 | 36220.9 |
| dna-3-methyladenine glycosylase i | AYO71_RS03005 | Not Available | Positive | 659058 - 659615 | 21032.4 |
| lysophospholipid acyltransferase | AYO71_RS03010 | Not Available | Positive | 659657 - 660544 | 32500.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
