Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AYO71_RS02915 | Not Available | Positive | 636413 - 636637 | 7700.28 |
| heavy metal translocating p-type atpase | AYO71_RS02920 | Not Available | Negative | 636730 - 638727 | 70532.3 |
| duf2790 domain-containing protein | AYO71_RS02925 | Not Available | Negative | 638930 - 639253 | 12283.8 |
| cusa/czca family heavy metal efflux rnd transporter | AYO71_RS02930 | Not Available | Negative | 639416 - 642577 | 113439.0 |
| efflux rnd transporter periplasmic adaptor subunit | AYO71_RS02935 | Not Available | Negative | 642602 - 643852 | 43980.4 |
| tolc family protein | AYO71_RS02940 | Not Available | Negative | 643921 - 645192 | 45829.4 |
| oprd family porin | AYO71_RS02945 | Not Available | Positive | 645597 - 646940 | 49400.2 |
| heavy metal response regulator transcription factor | AYO71_RS02950 | Not Available | Positive | 647430 - 648104 | 25999.6 |
| hypothetical protein | AYO71_RS02955 | Not Available | Positive | 648222 - 648545 | 11856.0 |
| hypothetical protein | AYO71_RS02960 | Not Available | Negative | 648647 - 649174 | 19313.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
