Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal sensor histidine kinase | AYO71_RS02870 | Not Available | Positive | 626769 - 628187 | 52117.1 |
| hypothetical protein | AYO71_RS02875 | Not Available | Negative | 628245 - 628832 | 21490.8 |
| hypothetical protein | AYO71_RS02880 | Not Available | Positive | 629099 - 629320 | 8258.55 |
| phospholipid carrier-dependent glycosyltransferase | AYO71_RS02885 | Not Available | Negative | 629403 - 630857 | 53933.9 |
| glycosyltransferase family 2 protein | AYO71_RS02890 | Not Available | Negative | 630851 - 631834 | 36886.0 |
| gtra family protein | AYO71_RS02895 | Not Available | Negative | 631800 - 632219 | 15006.6 |
| lysr family transcriptional regulator | AYO71_RS29650 | Not Available | Positive | 632477 - 632878 | 14849.9 |
| lysr substrate-binding domain-containing protein | AYO71_RS29655 | Not Available | Positive | 632889 - 633443 | 20996.5 |
| opro/oprp family phosphate-selective porin | AYO71_RS02905 | Not Available | Positive | 633654 - 634961 | 47946.4 |
| hypothetical protein | AYO71_RS02910 | Not Available | Positive | 635260 - 636285 | 37727.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
