Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AYO71_RS02825 | Not Available | Positive | 619086 - 620009 | 35076.3 |
| hypothetical protein | AYO71_RS02830 | Not Available | Positive | 620230 - 620439 | 7611.3 |
| hypothetical protein | AYO71_RS02835 | Not Available | Positive | 620454 - 620660 | 7766.14 |
| hypothetical protein | AYO71_RS30035 | Not Available | Negative | 620804 - 620932 | 4870.79 |
| phosphoethanolamine transferase | AYO71_RS02840 | Not Available | Negative | 621055 - 622752 | 62359.7 |
| zinc ribbon domain-containing protein | AYO71_RS28555 | Not Available | Positive | 623243 - 623581 | 11613.5 |
| cation diffusion facilitator family transporter | AYO71_RS02850 | Not Available | Positive | 623636 - 624541 | 32395.6 |
| duf3147 family protein | AYO71_RS02855 | Not Available | Positive | 624699 - 625049 | 13072.7 |
| duf2790 domain-containing protein | AYO71_RS02860 | Not Available | Negative | 625082 - 625408 | 12208.8 |
| heavy metal response regulator transcription factor | AYO71_RS02865 | Not Available | Positive | 626098 - 626772 | 25539.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
