Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication/repair protein recf | AYO71_RS02775 | Not Available | Positive | 605432 - 606535 | 41550.8 |
| dna topoisomerase (atp-hydrolyzing) subunit b | AYO71_RS02780 | Not Available | Positive | 606541 - 608958 | 90108.3 |
| tnsa endonuclease n-terminal domain-containing protein | AYO71_RS02785 | Not Available | Positive | 609794 - 610432 | 24466.4 |
| dde-type integrase/transposase/recombinase | AYO71_RS02790 | Not Available | Positive | 610413 - 612371 | 74348.9 |
| tnib family ntp-binding protein | AYO71_RS02795 | Not Available | Positive | 612368 - 613327 | 36305.5 |
| tniq family protein | AYO71_RS02800 | Not Available | Positive | 613403 - 615319 | 71202.0 |
| histone-like nucleoid-structuring protein, mvat/mvau family | AYO71_RS02805 | Not Available | Positive | 615376 - 615735 | 13493.1 |
| tigr04255 family protein | AYO71_RS02810 | Not Available | Positive | 616381 - 617223 | 31237.8 |
| transcriptional regulator | AYO71_RS02815 | Not Available | Positive | 617220 - 617903 | 24351.7 |
| hypothetical protein | AYO71_RS29645 | Not Available | Positive | 617906 - 618775 | 32903.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
