Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf411 domain-containing protein | AYO71_RS02625 | Not Available | Positive | 572160 - 572627 | 16596.9 |
| duf2790 domain-containing protein | AYO71_RS02630 | Not Available | Negative | 572931 - 573263 | 11971.3 |
| tniq family protein | AYO71_RS28530 | Not Available | Negative | 573451 - 575082 | 61615.4 |
| tnsd family tn7-like transposition protein | AYO71_RS28535 | Not Available | Negative | 575461 - 577128 | 62103.4 |
| atp-binding protein | AYO71_RS02655 | Not Available | Negative | 577146 - 578606 | 54859.8 |
| mu transposase c-terminal domain-containing protein | AYO71_RS02660 | Not Available | Negative | 578603 - 580771 | 82555.5 |
| tnsa endonuclease n-terminal domain-containing protein | AYO71_RS02665 | Not Available | Negative | 580768 - 581622 | 32729.5 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | AYO71_RS02670 | Not Available | Negative | 581904 - 583736 | 66468.9 |
| deor/glpr family dna-binding transcription regulator | AYO71_RS02675 | Not Available | Negative | 583739 - 584515 | 28511.4 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | AYO71_RS02680 | Not Available | Negative | 584723 - 586090 | 48781.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
