Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | AYO71_RS02535 | Not Available | Negative | 552956 - 555028 | 73529.6 |
| helix-turn-helix domain-containing protein | AYO71_RS28520 | Not Available | Positive | 555942 - 556349 | 15079.1 |
| copper homeostasis membrane protein copd | AYO71_RS02545 | Not Available | Negative | 556937 - 557875 | 34017.8 |
| copper homeostasis periplasmic binding protein copc | AYO71_RS02550 | Not Available | Negative | 557879 - 558262 | 13088.8 |
| heavy metal sensor histidine kinase | AYO71_RS02555 | Not Available | Negative | 558622 - 560010 | 51835.6 |
| heavy metal response regulator transcription factor | AYO71_RS02560 | Not Available | Negative | 560010 - 560696 | 25746.3 |
| co-regulatory protein ptra n-terminal domain-containing protein | AYO71_RS02565 | Not Available | Positive | 560901 - 561254 | 13558.4 |
| plastocyanin/azurin family copper-binding protein | AYO71_RS02570 | Not Available | Positive | 561412 - 561945 | 18898.7 |
| heavy metal translocating p-type atpase | AYO71_RS02575 | Not Available | Positive | 562126 - 564483 | 83813.4 |
| duf1289 domain-containing protein | AYO71_RS02580 | Not Available | Negative | 564521 - 564703 | 6855.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
