Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | AYO71_RS02490 | Not Available | Negative | 543240 - 543917 | 24677.9 |
| 3'-5' exonuclease | AYO71_RS02495 | Not Available | Positive | 544006 - 544554 | 20117.0 |
| mov34/mpn/pad-1 family protein | AYO71_RS02500 | Not Available | Negative | 544583 - 545065 | 17983.3 |
| thif family adenylyltransferase | AYO71_RS02505 | Not Available | Negative | 545062 - 546846 | 64621.9 |
| nucleotidyltransferase | AYO71_RS02510 | Not Available | Negative | 546830 - 548080 | 45710.8 |
| saved domain-containing protein | AYO71_RS02515 | Not Available | Negative | 548081 - 549247 | 42802.8 |
| sterol desaturase family protein | AYO71_RS02520 | Not Available | Negative | 549604 - 550476 | 33375.8 |
| cation transporter | AYO71_RS02525 | Not Available | Positive | 550635 - 551528 | 30954.8 |
| helix-turn-helix transcriptional regulator | AYO71_RS28515 | Not Available | Negative | 551585 - 552178 | 21201.6 |
| signal peptidase ii | AYO71_RS02530 | Not Available | Negative | 552322 - 552825 | 18191.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
