Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exoribonuclease | AYO71_RS02345 | Not Available | Negative | 514287 - 514748 | 17149.2 |
| hypothetical protein | AYO71_RS02355 | Not Available | Positive | 515215 - 515550 | 12543.3 |
| arsinothricin resistance n-acetyltransferase arsn1 family b | AYO71_RS02360 | Not Available | Positive | 515668 - 516219 | 20247.3 |
| duf1289 domain-containing protein | AYO71_RS28500 | Not Available | Negative | 516318 - 516500 | 6777.45 |
| hypothetical protein | AYO71_RS02365 | Not Available | Negative | 516503 - 516874 | 13736.3 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | AYO71_RS02370 | Not Available | Negative | 516914 - 517828 | 32440.3 |
| metal/formaldehyde-sensitive transcriptional repressor | AYO71_RS28505 | Not Available | Negative | 517848 - 518123 | 10090.0 |
| arsenate reductase (glutaredoxin) | AYO71_RS02380 | Not Available | Negative | 518408 - 518815 | 14748.0 |
| atp-dependent endonuclease | AYO71_RS02385 | Not Available | Positive | 519473 - 521260 | 65302.3 |
| atp-binding domain-containing protein | AYO71_RS02390 | Not Available | Positive | 521257 - 522546 | 47919.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
