Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2790 domain-containing protein | AYO71_RS02250 | Not Available | Negative | 497745 - 498074 | 12275.8 |
| heavy metal sensor histidine kinase | AYO71_RS02255 | Not Available | Negative | 498307 - 499628 | 46053.2 |
| tolc family protein | AYO71_RS02260 | Not Available | Negative | 499793 - 501040 | 45153.2 |
| duf3240 family protein | AYO71_RS02265 | Not Available | Negative | 501040 - 501342 | 11317.6 |
| efflux rnd transporter permease subunit | AYO71_RS02270 | Not Available | Negative | 501335 - 504421 | 110985.0 |
| efflux rnd transporter periplasmic adaptor subunit | AYO71_RS02275 | Not Available | Negative | 504418 - 505533 | 39631.7 |
| metal-sensing transcriptional repressor | AYO71_RS02280 | Not Available | Negative | 505569 - 505868 | 11277.5 |
| hupe/urej family protein | AYO71_RS02285 | Not Available | Positive | 506382 - 507119 | 26906.5 |
| hypothetical protein | AYO71_RS02290 | Not Available | Positive | 507132 - 507773 | 22796.3 |
| hypothetical protein | AYO71_RS30030 | Not Available | Positive | 507866 - 507994 | 4484.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
