Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | AYO71_RS28475 | Not Available | Positive | 477552 - 477740 | 6792.28 |
| is66-like element accessory protein tnpa | AYO71_RS28480 | Not Available | Positive | 477760 - 478092 | 11973.4 |
| is66 family insertion sequence element accessory protein tnpb | AYO71_RS29755 | Not Available | Positive | 478089 - 478424 | 12328.1 |
| is66 family transposase | AYO71_RS02175 | Not Available | Positive | 478486 - 480033 | 57869.8 |
| methyl-accepting chemotaxis protein | AYO71_RS30090 | Not Available | Negative | 480166 - 481485 | 49109.9 |
| bifunctional diguanylate cyclase/phosphodiesterase | AYO71_RS02185 | Not Available | Negative | 481638 - 483707 | 74547.7 |
| is66 family insertion sequence element accessory protein tnpb | AYO71_RS29770 | Not Available | Positive | 484273 - 484608 | 12318.2 |
| is66 family transposase | AYO71_RS02195 | Not Available | Positive | 484672 - 486210 | 57506.0 |
| acetyltransferase | AYO71_RS02200 | Not Available | Negative | 486262 - 486699 | 16302.5 |
| hypothetical protein | AYO71_RS02205 | Not Available | Negative | 486996 - 489182 | 82121.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
