Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | AYO71_RS02120 | Not Available | Negative | 465305 - 466150 | 31409.1 |
| adenosylhomocysteinase | AYO71_RS02125 | Not Available | Negative | 466337 - 467746 | 51380.7 |
| acyl-coa thioesterase | AYO71_RS02130 | Not Available | Positive | 468061 - 468465 | 15143.2 |
| formate/nitrite transporter family protein | AYO71_RS02135 | Not Available | Positive | 468639 - 469526 | 32314.7 |
| heavy metal sensor histidine kinase | AYO71_RS02140 | Not Available | Negative | 469527 - 469934 | 14589.5 |
| hypothetical protein | AYO71_RS02145 | Not Available | Positive | 470019 - 472307 | 86382.9 |
| hypothetical protein | AYO71_RS02150 | Not Available | Positive | 472291 - 474378 | 77857.2 |
| hypothetical protein | AYO71_RS02155 | Not Available | Positive | 474381 - 474986 | 21789.1 |
| site-specific integrase | AYO71_RS02160 | Not Available | Positive | 474979 - 476439 | 55487.7 |
| hypothetical protein | AYO71_RS02165 | Not Available | Positive | 476525 - 477076 | 20381.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
