Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | AYO71_RS02075 | Not Available | Negative | 454366 - 455085 | 26397.8 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | AYO71_RS02080 | Not Available | Negative | 455294 - 456700 | 52501.0 |
| flavin monoamine oxidase family protein | AYO71_RS02085 | Not Available | Positive | 456924 - 458693 | 62710.2 |
| hypothetical protein | AYO71_RS29750 | Not Available | Negative | 459056 - 459217 | 6429.8 |
| hypothetical protein | AYO71_RS02090 | Not Available | Negative | 459214 - 459552 | 12366.6 |
| cytochrome b | AYO71_RS02095 | Not Available | Positive | 459853 - 460404 | 20258.2 |
| ycei family protein | AYO71_RS02100 | Not Available | Positive | 460436 - 461014 | 20491.2 |
| dead/deah box helicase | AYO71_RS02105 | Not Available | Negative | 461165 - 463027 | 67349.0 |
| abc transporter substrate-binding protein | AYO71_RS02110 | Not Available | Negative | 463249 - 464061 | 30254.0 |
| hypothetical protein | AYO71_RS02115 | Not Available | Negative | 464149 - 465231 | 41659.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
