Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | AYO71_RS01925 | Not Available | Negative | 423694 - 424512 | 28211.9 |
| yggs family pyridoxal phosphate-dependent enzyme | AYO71_RS01930 | Not Available | Negative | 424536 - 425222 | 24604.4 |
| type iv pilus twitching motility protein pilt | AYO71_RS01935 | Not Available | Positive | 425279 - 426313 | 38065.1 |
| c40 family peptidase | AYO71_RS01940 | Not Available | Negative | 426409 - 427026 | 22960.7 |
| tm2 domain-containing protein | AYO71_RS01945 | Not Available | Positive | 427275 - 427709 | 16588.3 |
| dihydroorotase | AYO71_RS01950 | Not Available | Negative | 427805 - 429076 | 44155.1 |
| aspartate carbamoyltransferase catalytic subunit | AYO71_RS01955 | Not Available | Negative | 429073 - 430077 | 36479.5 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | AYO71_RS01960 | Not Available | Negative | 430105 - 430611 | 18309.2 |
| holliday junction resolvase ruvx | AYO71_RS01965 | Not Available | Negative | 430693 - 431130 | 16082.3 |
| yqge/algh family protein | AYO71_RS01970 | Not Available | Negative | 431130 - 431702 | 20517.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
