Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiazole synthase | AYO71_RS01875 | Not Available | Positive | 416170 - 416964 | 28434.8 |
| trna (guanosine(46)-n7)-methyltransferase trmb | AYO71_RS01880 | Not Available | Positive | 416974 - 417699 | 27149.6 |
| rna 2'-phosphotransferase | AYO71_RS01885 | Not Available | Negative | 417829 - 418377 | 20220.0 |
| duf3392 domain-containing protein | AYO71_RS01890 | Not Available | Negative | 418517 - 418840 | 11465.5 |
| radical sam family heme chaperone hemw | AYO71_RS01895 | Not Available | Negative | 418863 - 420068 | 44358.5 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | AYO71_RS01900 | Not Available | Negative | 420065 - 420661 | 21312.5 |
| duf4426 domain-containing protein | AYO71_RS01905 | Not Available | Negative | 420658 - 421092 | 15916.1 |
| methionine biosynthesis protein metw | AYO71_RS01910 | Not Available | Negative | 421119 - 421739 | 23597.1 |
| homoserine o-acetyltransferase | AYO71_RS01915 | Not Available | Negative | 421747 - 422886 | 41586.1 |
| yggt family protein | AYO71_RS01920 | Not Available | Negative | 423092 - 423682 | 21649.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
