Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | AYO71_RS01825 | Not Available | Negative | 406283 - 406885 | 22115.2 |
| pitrilysin family protein | AYO71_RS01830 | Not Available | Negative | 406885 - 408375 | 52726.1 |
| pitrilysin family protein | AYO71_RS01835 | Not Available | Negative | 408368 - 409723 | 49980.5 |
| signal recognition particle-docking protein ftsy | AYO71_RS01840 | Not Available | Positive | 410332 - 411819 | 52272.2 |
| cell division atp-binding protein ftse | AYO71_RS01845 | Not Available | Positive | 411816 - 412487 | 24571.2 |
| permease-like cell division protein ftsx | AYO71_RS01850 | Not Available | Positive | 412484 - 413509 | 37109.3 |
| rna polymerase sigma factor rpoh | AYO71_RS01855 | Not Available | Positive | 413625 - 414479 | 32584.6 |
| monofunctional biosynthetic peptidoglycan transglycosylase | AYO71_RS01860 | Not Available | Negative | 414659 - 415381 | 27063.4 |
| duf423 domain-containing protein | AYO71_RS01865 | Not Available | Positive | 415456 - 415836 | 13347.8 |
| sulfur carrier protein this | AYO71_RS01870 | Not Available | Positive | 415908 - 416108 | 7125.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
