Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphorylcholine phosphatase | AYO71_RS01725 | Not Available | Positive | 384215 - 385270 | 39238.4 |
| dihydroxy-acid dehydratase | AYO71_RS01730 | Not Available | Negative | 385471 - 387312 | 65738.5 |
| mfs transporter | AYO71_RS01735 | Not Available | Negative | 387569 - 388801 | 43931.7 |
| diiron oxygenase | AYO71_RS01740 | Not Available | Negative | 388794 - 389771 | 36905.6 |
| sagb family peptide dehydrogenase | AYO71_RS01745 | Not Available | Negative | 389768 - 390841 | 39513.0 |
| class i sam-dependent rrna methyltransferase | AYO71_RS01750 | Not Available | Negative | 391294 - 392490 | 43912.0 |
| type 1 glutamine amidotransferase domain-containing protein | AYO71_RS01755 | Not Available | Negative | 392653 - 393192 | 18900.3 |
| hdod domain-containing protein | AYO71_RS01760 | Not Available | Positive | 393421 - 394233 | 29970.8 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | AYO71_RS01765 | Not Available | Positive | 394246 - 395058 | 30129.8 |
| hypothetical protein | AYO71_RS01770 | Not Available | Positive | 395114 - 395437 | 11013.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
