Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | AYO71_RS01380 | Not Available | Positive | 305170 - 306504 | 49487.1 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | AYO71_RS01385 | Not Available | Positive | 306501 - 307688 | 43332.0 |
| duf4442 domain-containing protein | AYO71_RS01390 | Not Available | Positive | 307681 - 308166 | 18399.4 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | AYO71_RS01395 | Not Available | Positive | 308176 - 309393 | 44470.6 |
| extracellular solute-binding protein | AYO71_RS01400 | Not Available | Positive | 309640 - 310644 | 36807.1 |
| iron abc transporter permease | AYO71_RS01405 | Not Available | Positive | 310798 - 312411 | 58850.8 |
| glycine cleavage system aminomethyltransferase gcvt | AYO71_RS01410 | Not Available | Positive | 312835 - 313917 | 39679.7 |
| glycine cleavage system protein gcvh | AYO71_RS01415 | Not Available | Positive | 313964 - 314347 | 13421.6 |
| aminomethyl-transferring glycine dehydrogenase | AYO71_RS01420 | Not Available | Positive | 314548 - 317421 | 104027.0 |
| duf2388 domain-containing protein | AYO71_RS01425 | Not Available | Negative | 317561 - 317881 | 11044.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
