Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | AYO71_RS01285 | Not Available | Negative | 289643 - 290380 | 26830.8 |
| amino acid abc transporter permease | AYO71_RS01290 | Not Available | Negative | 290367 - 291017 | 23576.4 |
| amino acid abc transporter permease | AYO71_RS01295 | Not Available | Negative | 291014 - 291682 | 24541.6 |
| transporter substrate-binding domain-containing protein | AYO71_RS01300 | Not Available | Negative | 291704 - 292489 | 27961.9 |
| fadr/gntr family transcriptional regulator | AYO71_RS01305 | Not Available | Positive | 292746 - 293453 | 25259.4 |
| thioredoxin trxa | AYO71_RS01310 | Not Available | Positive | 293574 - 293903 | 11763.2 |
| transcription termination factor rho | AYO71_RS01315 | Not Available | Positive | 294152 - 295411 | 46929.1 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | AYO71_RS01320 | Not Available | Positive | 295650 - 297116 | 54718.3 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | AYO71_RS01325 | Not Available | Positive | 297116 - 298084 | 35727.9 |
| gamma-glutamylcyclotransferase | AYO71_RS01330 | Not Available | Positive | 298269 - 298937 | 25142.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
