Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | AYO71_RS01105 | Not Available | Negative | 250034 - 250741 | 25914.7 |
| tyrosine recombinase xerc | AYO71_RS01110 | Not Available | Negative | 250738 - 251637 | 33690.4 |
| duf484 family protein | AYO71_RS01115 | Not Available | Negative | 251640 - 252365 | 26834.1 |
| diaminopimelate epimerase | AYO71_RS01120 | Not Available | Negative | 252379 - 253209 | 30132.2 |
| diaminopimelate decarboxylase | AYO71_RS01125 | Not Available | Negative | 253213 - 254460 | 45095.8 |
| lps translocon maturation chaperone lptm | AYO71_RS28445 | Not Available | Negative | 254470 - 254640 | 6009.14 |
| iron donor protein cyay | AYO71_RS01130 | Not Available | Positive | 254955 - 255287 | 12682.6 |
| duf1289 domain-containing protein | AYO71_RS28450 | Not Available | Positive | 255291 - 255512 | 8123.72 |
| nucleoside diphosphate kinase regulator | AYO71_RS01135 | Not Available | Positive | 255767 - 256186 | 14848.7 |
| class i adenylate cyclase | AYO71_RS01140 | Not Available | Negative | 256196 - 259039 | 108218.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
