Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Glycoside hydrolase family 19 protein | AYO71_RS08590 | Not Available | Positive | 1970228 - 1970794 | 20847.9 |
| Lysozyme | AYO71_RS08595 | Not Available | Positive | 1970773 - 1971291 | 18858.2 |
| cina family protein | AYO71_RS08600 | Not Available | Positive | 1971359 - 1971859 | 17707.9 |
| Dna strand exchange and recombination protein with protease and nuclease activity | AYO71_RS08605 | Not Available | Positive | 1971943 - 1973001 | 37464.2 |
| recombination regulator recx | AYO71_RS08610 | Not Available | Positive | 1973010 - 1973480 | 18072.7 |
| Dpra superfamily protein | AYO71_RS08615 | Not Available | Negative | 1973541 - 1974656 | 42165.4 |
| hypothetical protein | AYO71_RS08620 | Not Available | Positive | 1974998 - 1975195 | 7649.16 |
| pa3611 family quorum-sensing-regulated virulence factor | AYO71_RS08625 | Not Available | Negative | 1975196 - 1975621 | 15317.3 |
| Histone-like prokaryotic dna-binding protein family | AYO71_RS12655 | Not Available | Positive | 2869059 - 2869361 | 11476.8 |
| merr family transcriptional regulator | AYO71_RS12660 | Not Available | Positive | 2869342 - 2869698 | 13921.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
