Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | AYO71_RS00960 | Not Available | Negative | 219946 - 221256 | 46827.4 |
| ykgj family cysteine cluster protein | AYO71_RS00965 | Not Available | Positive | 221403 - 221756 | 13283.1 |
| lrp/asnc ligand binding domain-containing protein | AYO71_RS00970 | Not Available | Negative | 221870 - 222358 | 18675.9 |
| d-amino acid dehydrogenase | AYO71_RS00975 | Not Available | Positive | 222512 - 223816 | 47240.9 |
| rida family protein | AYO71_RS00980 | Not Available | Positive | 223788 - 224141 | 12770.3 |
| alanine racemase | AYO71_RS00985 | Not Available | Positive | 224235 - 225308 | 38932.3 |
| cupin domain-containing protein | AYO71_RS00990 | Not Available | Positive | 225397 - 225945 | 20042.1 |
| cytochrome c5 family protein | AYO71_RS00995 | Not Available | Positive | 226127 - 226540 | 13792.7 |
| acetyl-coa hydrolase/transferase c-terminal domain-containing protein | AYO71_RS01000 | Not Available | Positive | 226709 - 228631 | 70749.8 |
| xanthine phosphoribosyltransferase | AYO71_RS01005 | Not Available | Negative | 228763 - 229335 | 20425.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
