Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radc family protein | AYO71_RS00910 | Not Available | Positive | 209416 - 210090 | 24948.1 |
| abc transporter substrate-binding protein | AYO71_RS00915 | Not Available | Negative | 210175 - 211764 | 58166.3 |
| 50s ribosomal protein l28 | AYO71_RS00920 | Not Available | Positive | 212211 - 212444 | 8980.08 |
| 50s ribosomal protein l33 | AYO71_RS00925 | Not Available | Positive | 212456 - 212611 | 6022.43 |
| cupin domain-containing protein | AYO71_RS00930 | Not Available | Negative | 212773 - 213135 | 13423.8 |
| aldehyde dehydrogenase | AYO71_RS00935 | Not Available | Positive | 213372 - 214865 | 53064.5 |
| mfs transporter | AYO71_RS00940 | Not Available | Positive | 215126 - 216268 | 40116.3 |
| phospholipase d family protein | AYO71_RS00945 | Not Available | Negative | 216356 - 217924 | 58147.2 |
| plp-dependent aminotransferase family protein | AYO71_RS00950 | Not Available | Negative | 217986 - 219407 | 52460.7 |
| duf1127 domain-containing protein | AYO71_RS00955 | Not Available | Positive | 219583 - 219825 | 9229.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
