Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4870 domain-containing protein | AYO71_RS00860 | Not Available | Positive | 200559 - 200927 | 13886.5 |
| sodium/glutamate symporter | AYO71_RS00865 | Not Available | Positive | 201298 - 202506 | 42179.1 |
| exodeoxyribonuclease iii | AYO71_RS00870 | Not Available | Negative | 202575 - 203354 | 29761.2 |
| orotate phosphoribosyltransferase | AYO71_RS00875 | Not Available | Positive | 203437 - 204081 | 23064.6 |
| hypothetical protein | AYO71_RS00880 | Not Available | Negative | 204309 - 204491 | 6606.9 |
| hypothetical protein | AYO71_RS00885 | Not Available | Negative | 204607 - 204837 | 8393.77 |
| acetylglutamate kinase | AYO71_RS00890 | Not Available | Negative | 205047 - 205952 | 31746.1 |
| heavy metal sensor histidine kinase | AYO71_RS00895 | Not Available | Negative | 205970 - 207373 | 50998.0 |
| dutp diphosphatase | AYO71_RS00900 | Not Available | Negative | 207613 - 208068 | 16221.8 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | AYO71_RS00905 | Not Available | Negative | 208074 - 209282 | 42884.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
