Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb system transport protein exbd | AYO71_RS00810 | Not Available | Negative | 191665 - 192093 | 15257.6 |
| tonb-system energizer exbb | AYO71_RS00815 | Not Available | Negative | 192100 - 193053 | 33017.1 |
| sdr family oxidoreductase | AYO71_RS00820 | Not Available | Positive | 193242 - 194099 | 30817.4 |
| hypothetical protein | AYO71_RS00825 | Not Available | Negative | 194240 - 194980 | 26316.7 |
| rida family protein | AYO71_RS00830 | Not Available | Negative | 195046 - 195426 | 13481.4 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | AYO71_RS00835 | Not Available | Negative | 195451 - 197556 | 78559.6 |
| dna-directed rna polymerase subunit omega | AYO71_RS00840 | Not Available | Negative | 197614 - 197877 | 9912.7 |
| guanylate kinase | AYO71_RS00845 | Not Available | Negative | 198046 - 198666 | 23346.7 |
| yicc/yloc family endoribonuclease | AYO71_RS00850 | Not Available | Negative | 198679 - 199542 | 31993.5 |
| ribonuclease ph | AYO71_RS00855 | Not Available | Positive | 199811 - 200533 | 25778.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
