Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paar domain-containing protein | AYO71_RS00660 | Not Available | Positive | 153542 - 154066 | 17417.7 |
| duf6402 family protein | AYO71_RS00665 | Not Available | Positive | 154126 - 155094 | 35941.8 |
| hypothetical protein | AYO71_RS29170 | Not Available | Positive | 155091 - 155504 | 15342.5 |
| type vi secretion system baseplate subunit tssf | AYO71_RS00670 | Not Available | Positive | 155629 - 157416 | 67990.0 |
| type vi secretion system baseplate subunit tssg | AYO71_RS00675 | Not Available | Positive | 157380 - 158387 | 38707.6 |
| type vi secretion system atpase tssh | AYO71_RS00680 | Not Available | Positive | 158399 - 161056 | 96547.9 |
| sigma-54-dependent fis family transcriptional regulator | AYO71_RS00685 | Not Available | Positive | 161067 - 162587 | 55651.9 |
| hypothetical protein | AYO71_RS00690 | Not Available | Positive | 162885 - 163025 | 5073.11 |
| type vi secretion system-associated fha domain protein tagh | AYO71_RS00695 | Not Available | Positive | 163044 - 164240 | 44506.4 |
| type vi secretion system lipoprotein tssj | AYO71_RS00700 | Not Available | Positive | 164246 - 164746 | 18491.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
