Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family metallopeptidase | AYO71_RS00555 | Not Available | Positive | 133158 - 134054 | 32392.1 |
| hemolysin family protein | AYO71_RS00560 | Not Available | Negative | 134162 - 135502 | 50007.1 |
| phosphate regulon sensor histidine kinase phor | AYO71_RS00565 | Not Available | Negative | 135626 - 136912 | 48180.5 |
| phosphate regulon transcriptional regulator phob | AYO71_RS00570 | Not Available | Negative | 137050 - 137739 | 25596.9 |
| hypothetical protein | AYO71_RS00575 | Not Available | Positive | 137891 - 138274 | 13674.6 |
| 4-hydroxybenzoate octaprenyltransferase | AYO71_RS00580 | Not Available | Negative | 138358 - 139248 | 33149.9 |
| chorismate lyase | AYO71_RS00585 | Not Available | Negative | 139248 - 139808 | 20973.7 |
| rubredoxin | AYO71_RS00590 | Not Available | Positive | 140010 - 140177 | 6221.4 |
| nad(p)/fad-dependent oxidoreductase | AYO71_RS00595 | Not Available | Positive | 140197 - 141345 | 40250.2 |
| hu family dna-binding protein | AYO71_RS00600 | Not Available | Positive | 141536 - 141811 | 9820.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
