Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter substrate-binding protein | AYO71_RS00455 | Not Available | Negative | 109461 - 110555 | 40121.2 |
| histone deacetylase family protein | AYO71_RS00460 | Not Available | Negative | 110552 - 111577 | 37595.0 |
| arac family transcriptional regulator | AYO71_RS00465 | Not Available | Negative | 111777 - 112769 | 36974.3 |
| asparaginase | AYO71_RS00470 | Not Available | Negative | 112942 - 113946 | 35145.3 |
| sodium:alanine symporter family protein | AYO71_RS00475 | Not Available | Negative | 114118 - 115566 | 51738.8 |
| aspartate ammonia-lyase | AYO71_RS00480 | Not Available | Negative | 116051 - 117475 | 51027.1 |
| lysr substrate-binding domain-containing protein | AYO71_RS00485 | Not Available | Positive | 117656 - 118564 | 33072.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | AYO71_RS00490 | Not Available | Positive | 118900 - 119391 | 16858.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | AYO71_RS00495 | Not Available | Positive | 119402 - 120484 | 38694.4 |
| glsb/yeaq/ymge family stress response membrane protein | AYO71_RS00500 | Not Available | Positive | 120597 - 120842 | 8181.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
