Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AYO71_RS00160 | Not Available | Positive | 38164 - 39090 | 33421.4 |
| glutathione s-transferase family protein | AYO71_RS00165 | Not Available | Positive | 39195 - 39821 | 22394.1 |
| glycosyltransferase family 4 protein | AYO71_RS00170 | Not Available | Negative | 39832 - 40962 | 42631.3 |
| glycosyltransferase family 1 protein | AYO71_RS00175 | Not Available | Negative | 40963 - 42093 | 41432.7 |
| glycosyltransferase family 1 protein | AYO71_RS00180 | Not Available | Negative | 42077 - 43444 | 52347.9 |
| abc transporter atp-binding protein | AYO71_RS00185 | Not Available | Negative | 43441 - 44694 | 46547.0 |
| abc transporter permease | AYO71_RS00190 | Not Available | Negative | 44694 - 45491 | 30080.1 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | AYO71_RS00195 | Not Available | Negative | 45492 - 46934 | 52332.3 |
| gdp-mannose 4,6-dehydratase | AYO71_RS00200 | Not Available | Negative | 46938 - 47909 | 36216.3 |
| gdp-mannose 4,6-dehydratase | AYO71_RS00205 | Not Available | Negative | 47906 - 48820 | 33513.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
