Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsinothricin export permease arsq | AYO71_RS00115 | Not Available | Positive | 26635 - 27840 | 42275.4 |
| arsinothricin biosynthesis radical sam protein arsl | AYO71_RS00120 | Not Available | Positive | 27913 - 29187 | 47748.3 |
| hypothetical protein | AYO71_RS00125 | Not Available | Positive | 29199 - 30080 | 31886.5 |
| arsinothricin biosynthesis methyltransferase arsm | AYO71_RS00130 | Not Available | Positive | 30097 - 31146 | 37900.6 |
| aquaporin | AYO71_RS00135 | Not Available | Positive | 31216 - 31926 | 25082.6 |
| arsinothricin resistance n-acetyltransferase arsn1 family b | AYO71_RS00140 | Not Available | Positive | 32065 - 32610 | 19903.0 |
| duf6957 family protein | AYO71_RS29165 | Not Available | Positive | 32733 - 33125 | 14219.3 |
| helix-turn-helix domain-containing protein | AYO71_RS00145 | Not Available | Positive | 33526 - 34350 | 30717.1 |
| atp-binding domain-containing protein | AYO71_RS00150 | Not Available | Negative | 34360 - 35649 | 47919.7 |
| atp-dependent endonuclease | AYO71_RS00155 | Not Available | Negative | 35646 - 37433 | 65302.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
