Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate protein | AYO71_RS22190 | Not Available | Positive | 4945229 - 4946350 | 40101.6 |
| Gp25, tail fiber | AYO71_RS22195 | Not Available | Positive | 4946343 - 4946894 | 20529.9 |
| Gp52 | AYO71_RS22200 | Not Available | Positive | 4946894 - 4947748 | 28252.4 |
| Com translational regulator | AYO71_RS29030 | Not Available | Positive | 4947823 - 4948023 | 7315.89 |
| Gp127 | AYO71_RS22205 | Not Available | Positive | 4947984 - 4948835 | 31007.8 |
| Putative dna-binding response regulator | AYO71_RS22210 | Not Available | Negative | 4948953 - 4949648 | 25257.5 |
| helix-turn-helix domain-containing protein | AYO71_RS28405 | Not Available | Negative | 618 - 1025 | 15079.1 |
| heavy metal translocating p-type atpase | AYO71_RS00015 | Not Available | Positive | 1939 - 4011 | 73529.6 |
| signal peptidase ii | AYO71_RS00020 | Not Available | Positive | 4142 - 4645 | 18191.1 |
| helix-turn-helix transcriptional regulator | AYO71_RS28410 | Not Available | Positive | 4789 - 5382 | 21201.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
