Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Pf11985 family protein | AYO71_RS22015 | Not Available | Positive | 4915976 - 4916527 | 20164.1 |
| Putative portal protein | AYO71_RS22020 | Not Available | Positive | 4916524 - 4918131 | 59745.2 |
| Putative portal protein | AYO71_RS22025 | Not Available | Positive | 4918128 - 4919618 | 55078.6 |
| Virion morphogenesis protein | AYO71_RS22030 | Not Available | Positive | 4919620 - 4920420 | 29448.2 |
| Capsid and scaffold protein | AYO71_RS22035 | Not Available | Positive | 4920621 - 4921097 | 17294.5 |
| hypothetical protein | AYO71_RS29415 | Not Available | Positive | 4921571 - 4921912 | 12342.4 |
| hypothetical protein | AYO71_RS22040 | Not Available | Negative | 4922116 - 4922820 | 26381.7 |
| atp-binding protein | AYO71_RS29025 | Not Available | Positive | 4923139 - 4924464 | 48967.0 |
| hnh endonuclease | AYO71_RS29420 | Not Available | Positive | 4924468 - 4925232 | 29395.5 |
| hypothetical protein | AYO71_RS22055 | Not Available | Negative | 4925425 - 4925991 | 20841.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
