Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | AYO71_RS12985 | Not Available | Positive | 2914392 - 2915072 | 24920.6 |
| Tail fiber protein | AYO71_RS29870 | Not Available | Positive | 2915095 - 2916108 | 34553.3 |
| Hypothetical protein | AYO71_RS12995 | Not Available | Positive | 2916105 - 2916440 | 12208.3 |
| Hypothetical protein | AYO71_RS13000 | Not Available | Positive | 2916437 - 2916802 | 13105.8 |
| Putative endolysin | AYO71_RS13005 | Not Available | Positive | 2916861 - 2917283 | 15712.6 |
| Attr | Not Available | Not Available | Positive | 2917874 - 2917924 | Not Available |
| Attl | Not Available | Not Available | Positive | 3478650 - 3478729 | Not Available |
| Integrase | AYO71_RS15555 | Not Available | Negative | 3478854 - 3479903 | 39868.1 |
| Hypothetical protein | AYO71_RS15560 | Not Available | Negative | 3479905 - 3480147 | 9258.19 |
| hypothetical protein | AYO71_RS15565 | Not Available | Negative | 3480192 - 3480440 | 9037.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
