Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | AYO71_RS03660 | Not Available | Positive | 817696 - 819291 | 57559.6 |
| duf2789 domain-containing protein | AYO71_RS03665 | Not Available | Positive | 819370 - 819615 | 9145.77 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | AYO71_RS03670 | Not Available | Positive | 819706 - 819951 | 8806.68 |
| heavy metal sensor histidine kinase | AYO71_RS03675 | Not Available | Positive | 819941 - 820221 | 10107.9 |
| marr family winged helix-turn-helix transcriptional regulator | AYO71_RS03680 | Not Available | Positive | 820585 - 821013 | 15545.9 |
| fusc family protein | AYO71_RS03685 | Not Available | Positive | 821010 - 823073 | 76572.9 |
| duf1656 domain-containing protein | AYO71_RS03690 | Not Available | Positive | 823070 - 823279 | 7956.16 |
| hlyd family secretion protein | AYO71_RS03695 | Not Available | Positive | 823276 - 824163 | 32937.6 |
| efflux transporter outer membrane subunit | AYO71_RS03700 | Not Available | Positive | 824160 - 825602 | 51178.6 |
| hypothetical protein | AYO71_RS03705 | Not Available | Positive | 825695 - 826330 | 24287.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
