Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | D26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1269900 bp
Thymine Count
1276925 bp
Guanine Count
1881759 bp
Cytosine Count
1873177 bp
Genome Length
6301761 bp
Protein-coding Genes
5499 genes
Non-Coding Genes
288 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | AYO71_RS03560 | Not Available | Negative | 775861 - 776361 | 18929.9 |
| methyl-accepting chemotaxis protein | AYO71_RS03565 | Not Available | Positive | 776673 - 778553 | 67360.0 |
| srpbcc family protein | AYO71_RS03570 | Not Available | Negative | 778680 - 779147 | 16809.0 |
| non-ribosomal peptide synthetase | AYO71_RS03575 | Not Available | Negative | 779170 - 782562 | 124629.0 |
| diiron oxygenase | AYO71_RS03580 | Not Available | Negative | 782573 - 783502 | 35092.1 |
| duf3050 domain-containing protein | AYO71_RS03585 | Not Available | Negative | 783499 - 784275 | 28936.5 |
| gntr family transcriptional regulator | AYO71_RS03590 | Not Available | Negative | 784976 - 785686 | 26720.4 |
| cysteine protease lapg | AYO71_RS03595 | Not Available | Positive | 785883 - 786575 | 26013.4 |
| cyclic di-gmp receptor lapd | AYO71_RS03600 | Not Available | Positive | 786590 - 788536 | 71981.8 |
| hypothetical protein | AYO71_RS03605 | Not Available | Negative | 788740 - 789078 | 12445.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
