Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | A9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1275333 bp
Thymine Count
1268716 bp
Guanine Count
1910030 bp
Cytosine Count
1922075 bp
Genome Length
6376154 bp
Protein-coding Genes
5599 genes
Non-Coding Genes
273 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine-binding periplasmic protein | A9HBioS_5664 | Not Available | Negative | 6206468 - 6207565 | 39937.6 |
| abc-type spermidine/putrescine transport system permease component ii | A9HBioS_5665 | Not Available | Negative | 6207765 - 6208640 | 31733.7 |
| abc-type spermidine/putrescine transport system permease component i | A9HBioS_5666 | Not Available | Negative | 6208637 - 6209551 | 34137.9 |
| pota | A9HBioS_5667 | Not Available | Negative | 6209548 - 6210690 | 42660.7 |
| putative glutamine amidotransferase | A9HBioS_5668 | Not Available | Negative | 6210984 - 6211745 | 26918.3 |
| glutamine synthetase | A9HBioS_5669 | Not Available | Positive | 6212028 - 6213404 | 50769.2 |
| nad-dependent aldehyde dehydrogenase | A9HBioS_5670 | Not Available | Positive | 6213582 - 6215072 | 53396.8 |
| glycine/d-amino acid oxidase | A9HBioS_5671 | Not Available | Positive | 6215125 - 6216408 | 47255.7 |
| cupin | A9HBioS_5672 | Not Available | Positive | 6216757 - 6217305 | 20029.8 |
| hypothetical protein | A9HBioS_5673 | Not Available | Negative | 6217528 - 6217761 | 8964.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
