Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | A9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1275333 bp
Thymine Count
1268716 bp
Guanine Count
1910030 bp
Cytosine Count
1922075 bp
Genome Length
6376154 bp
Protein-coding Genes
5599 genes
Non-Coding Genes
273 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system effector hcp1 | A9HBioS_0021 | Not Available | Positive | 19034 - 19549 | 18975.2 |
| type vi secretion system vgr | A9HBioS_0022 | Not Available | Positive | 19678 - 22584 | 105373.0 |
| rhs | A9HBioS_0023 | Not Available | Positive | 22581 - 27233 | 173790.0 |
| hypothetical protein | A9HBioS_0024 | Not Available | Positive | 27230 - 27559 | 12368.5 |
| hypothetical protein | A9HBioS_0025 | Not Available | Positive | 27627 - 27890 | 8699.6 |
| rhs | A9HBioS_0026 | Not Available | Positive | 28009 - 32715 | 176922.0 |
| hypothetical protein | A9HBioS_0027 | Not Available | Positive | 32731 - 33345 | 23128.5 |
| hypothetical protein | A9HBioS_0028 | Not Available | Positive | 33366 - 33983 | 23595.1 |
| hypothetical protein | A9HBioS_0029 | Not Available | Positive | 34091 - 34486 | 14140.9 |
| hypothetical protein | A9HBioS_0030 | Not Available | Positive | 34525 - 34908 | 13870.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
