Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | A9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1275333 bp
Thymine Count
1268716 bp
Guanine Count
1910030 bp
Cytosine Count
1922075 bp
Genome Length
6376154 bp
Protein-coding Genes
5599 genes
Non-Coding Genes
273 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane secretion effector | A9HBioS_5722 | Not Available | Positive | 6272056 - 6273294 | 44096.9 |
| dj-1 family protein | A9HBioS_5723 | Not Available | Negative | 6273301 - 6273852 | 19029.4 |
| hypothetical protein | A9HBioS_5724 | Not Available | Negative | 6273919 - 6274368 | 15697.7 |
| permease | A9HBioS_5725 | Not Available | Positive | 6274591 - 6275886 | 44949.5 |
| trna (uracil-5-)-methyltransferase | A9HBioS_5726 | Not Available | Positive | 6275883 - 6276962 | 40720.4 |
| pepsy-associated tm helix | A9HBioS_5727 | Not Available | Negative | 6277268 - 6278446 | 44094.4 |
| tonb-dependent siderophore receptor | A9HBioS_5728 | Not Available | Negative | 6278524 - 6281025 | 91554.5 |
| fe2+-dicitrate sensor membrane component | A9HBioS_5729 | Not Available | Negative | 6281113 - 6282114 | 37169.2 |
| rna polymerase sigma factor | A9HBioS_5730 | Not Available | Negative | 6282114 - 6282656 | 20547.9 |
| methyl-accepting chemotaxis protein | A9HBioS_5731 | Not Available | Positive | 6282943 - 6284823 | 67365.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
